Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | ASE92_09560 | Not Available | Positive | 2399599 - 2400165 | 22002.3 |
| protease do | ASE92_09565 | Q48EU9 | Positive | 2400174 - 2401274 | 40157.9 |
| peroxidase | ASE92_09570 | Q54SE2 | Positive | 2401433 - 2402068 | 23499.8 |
| cold-shock protein | ASE92_09575 | O30875 | Positive | 2402277 - 2402474 | 7329.8 |
| hypothetical protein | ASE92_09580 | Not Available | Negative | 2402538 - 2403722 | 44166.0 |
| aspartate kinase | ASE92_09585 | Q57991 | Negative | 2403739 - 2405019 | 47873.0 |
| gnat family acetyltransferase | ASE92_09590 | Q9D5N8 | Negative | 2405021 - 2405488 | 17856.4 |
| alanine racemase | ASE92_09595 | O66631 | Negative | 2405488 - 2406186 | 26440.0 |
| hypothetical protein | ASE92_09600 | Not Available | Positive | 2406296 - 2406814 | 19454.6 |
| dna mismatch repair protein muts | ASE92_09605 | B0S1P2 | Positive | 2406816 - 2409194 | 89801.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

