Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASE92_06980 | Not Available | Negative | 1813494 - 1813904 | 14739.8 |
| pseudouridine synthase | ASE92_06985 | B6YQE4 | Negative | 1813959 - 1814759 | 30857.3 |
| preprotein translocase subunit seca | ASE92_06990 | B4EXS5 | Positive | 1814841 - 1815212 | 14515.2 |
| hypothetical protein | ASE92_06995 | Not Available | Negative | 1815209 - 1815604 | 14432.4 |
| pyrophosphatase | ASE92_07000 | P44723 | Negative | 1815606 - 1816412 | 30740.6 |
| hypothetical protein | ASE92_07005 | Not Available | Negative | 1816423 - 1816872 | 16855.3 |
| hypothetical protein | ASE92_07010 | Not Available | Negative | 1816908 - 1817204 | 10862.6 |
| permease | ASE92_07015 | O34472 | Negative | 1817208 - 1818317 | 41246.6 |
| alcohol dehydrogenase | ASE92_07020 | P77735 | Negative | 1818399 - 1819346 | 35069.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | ASE92_07025 | Q04VP5 | Negative | 1819459 - 1820133 | 24933.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

