Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna nucleotidyltransferase | ASE92_06930 | O67911 | Negative | 1802927 - 1804333 | 53408.7 |
| translation factor sua5 | ASE92_06935 | Q3IDH7 | Negative | 1804444 - 1805010 | 21059.4 |
| hypothetical protein | ASE92_06940 | Not Available | Positive | 1805207 - 1805773 | 21202.4 |
| mannosyltransferase | ASE92_06945 | Not Available | Negative | 1805774 - 1806895 | 42786.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ASE92_06950 | Q6F9A5 | Negative | 1806994 - 1807812 | 29604.1 |
| rna-binding protein | ASE92_06955 | P44754 | Positive | 1808001 - 1808402 | 15139.1 |
| abc transporter-associated protein ecsc | ASE92_06960 | P55341 | Negative | 1808399 - 1809169 | 29354.8 |
| guanine deaminase | ASE92_06965 | O34598 | Negative | 1809416 - 1809892 | 17666.4 |
| outer membrane chaperone skp | ASE92_06970 | Not Available | Negative | 1809958 - 1810557 | 22302.2 |
| dna topoisomerase iv subunit b | ASE92_06975 | P05652 | Positive | 1811446 - 1813404 | 72141.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

