Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | ASE92_06395 | Q08623 | Positive | 1525323 - 1525994 | 25129.8 |
| dna mismatch repair protein mutt | ASE92_06400 | Not Available | Positive | 1525994 - 1526692 | 26925.7 |
| Trna-lys | Not Available | Not Available | Positive | 1526856 - 1526928 | Not Available |
| hypothetical protein | ASE92_06410 | Not Available | Positive | 1527207 - 1527518 | 11606.0 |
| hypothetical protein | ASE92_06415 | Not Available | Negative | 1527932 - 1529044 | 41412.6 |
| glycosyl hydrolase family 5 | ASE92_06420 | W8QRE4 | Negative | 1529134 - 1530885 | 66590.5 |
| glucosylceramidase | ASE92_06425 | Q9UB00 | Negative | 1530902 - 1532299 | 51982.7 |
| carbohydrate-binding protein susd | ASE92_06430 | Not Available | Negative | 1532378 - 1533913 | 55586.1 |
| susc/raga family tonb-linked outer membrane protein | ASE92_06435 | Not Available | Negative | 1533918 - 1537058 | 114321.0 |
| hypothetical protein | ASE92_06440 | Not Available | Negative | 1537551 - 1538435 | 31763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

