Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | ASE92_06345 | Not Available | Negative | 1510634 - 1513441 | 104096.0 |
| polygalacturonase | ASE92_06350 | P27644 | Negative | 1513448 - 1515025 | 58285.5 |
| glycoside hydrolase | ASE92_06355 | Not Available | Negative | 1515167 - 1516720 | 60073.8 |
| hypothetical protein | ASE92_06360 | Not Available | Negative | 1516720 - 1519464 | 103934.0 |
| short-chain dehydrogenase | ASE92_06365 | Not Available | Positive | 1519803 - 1520567 | 26899.3 |
| ureidoglycolate lyase | ASE92_06370 | A9ALD1 | Positive | 1520596 - 1521450 | 31116.9 |
| l-fucose mutarotase | ASE92_06375 | Q8P3K1 | Positive | 1521452 - 1521781 | 12877.5 |
| amidohydrolase | ASE92_06380 | Not Available | Positive | 1521790 - 1522611 | 31914.1 |
| alpha-hydroxy-acid oxidizing enzyme | ASE92_06385 | A5UFG9 | Positive | 1522707 - 1523876 | 43089.5 |
| aldose epimerase | ASE92_06390 | Q5EA79 | Negative | 1524042 - 1525193 | 41847.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

