Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | ASE92_05680 | P52985 | Positive | 1313439 - 1314683 | 46572.5 |
| hypothetical protein | ASE92_05685 | Not Available | Negative | 1314758 - 1315213 | 17201.7 |
| hypothetical protein | ASE92_05690 | P44908 | Negative | 1315229 - 1315999 | 28719.8 |
| multidrug transporter | ASE92_05695 | P32482 | Positive | 1316144 - 1317370 | 44024.1 |
| tonb-dependent receptor | ASE92_05700 | Not Available | Negative | 1317382 - 1319808 | 92368.5 |
| ribulose phosphate epimerase | ASE92_05705 | O34557 | Negative | 1319981 - 1320652 | 24221.5 |
| polyribonucleotide nucleotidyltransferase | ASE92_05710 | Q11U61 | Negative | 1320759 - 1322894 | 77540.4 |
| 30s ribosomal protein s15 | ASE92_05715 | A0LYC2 | Negative | 1323071 - 1323355 | 10964.5 |
| thioesterase | ASE92_05720 | P77712 | Positive | 1323768 - 1324187 | 16317.7 |
| mate family efflux transporter | ASE92_05725 | Not Available | Positive | 1324861 - 1326285 | 50771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

