Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | ASE92_05580 | O34340 | Negative | 1290298 - 1291548 | 43966.4 |
| hypothetical protein | ASE92_05585 | Not Available | Negative | 1291553 - 1291777 | 8164.32 |
| short-chain dehydrogenase | ASE92_05590 | P39577 | Negative | 1291797 - 1292564 | 27637.1 |
| transcriptional regulator | ASE92_05595 | Q9RMY4 | Negative | 1292615 - 1293202 | 21442.1 |
| transcriptional regulator | ASE92_05600 | Not Available | Positive | 1293388 - 1294299 | 35341.0 |
| short-chain dehydrogenase | ASE92_05605 | A6SSW9 | Positive | 1294382 - 1295215 | 29609.7 |
| short-chain dehydrogenase | ASE92_05610 | Not Available | Positive | 1295334 - 1296185 | 30574.0 |
| redoxin | ASE92_05615 | Not Available | Negative | 1296307 - 1296774 | 17957.1 |
| hydrolase | ASE92_05620 | P0AFV6 | Negative | 1296955 - 1297452 | 18311.1 |
| dna mismatch repair protein muts | ASE92_05625 | A6LG92 | Negative | 1297538 - 1300150 | 98137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

