Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | ASE92_05375 | Q8MTJ7 | Negative | 1241278 - 1241757 | 17389.9 |
| spheroidene monooxygenase | ASE92_05380 | P17055 | Positive | 1241872 - 1242573 | 26657.3 |
| hypothetical protein | ASE92_05385 | Not Available | Positive | 1242576 - 1242827 | 9694.71 |
| stress responsive alpha-beta barrel domain-containing protein | ASE92_05390 | Not Available | Negative | 1243161 - 1243499 | 13051.3 |
| hypothetical protein | ASE92_05395 | Not Available | Negative | 1243586 - 1244083 | 16816.1 |
| atp-binding protein | ASE92_05400 | Not Available | Negative | 1244212 - 1244937 | 27430.9 |
| nad-dependent deacylase | ASE92_05405 | Q8A3H9 | Negative | 1244927 - 1245613 | 25582.5 |
| abc transporter substrate-binding protein | ASE92_05410 | Not Available | Negative | 1245709 - 1246653 | 35030.4 |
| hypothetical protein | ASE92_05415 | Not Available | Negative | 1246787 - 1247377 | 22317.8 |
| hypothetical protein | ASE92_05420 | Q1CBU1 | Negative | 1247474 - 1249357 | 68734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

