Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor p (ef-p) | ASE92_05325 | Not Available | Positive | 1232833 - 1233318 | 18889.0 |
| aaa family atpase | ASE92_05330 | Not Available | Positive | 1233327 - 1233953 | 23726.9 |
| mate family efflux transporter | ASE92_05335 | Q6LQ49 | Positive | 1234090 - 1235445 | 49206.8 |
| hypothetical protein | ASE92_05340 | Not Available | Negative | 1235513 - 1236247 | 27257.6 |
| pseudouridylate synthase | ASE92_05345 | Q9KTL4 | Negative | 1236286 - 1236969 | 26294.0 |
| deacetylase | ASE92_05350 | P28606 | Negative | 1236993 - 1237895 | 33784.3 |
| hypothetical protein | ASE92_05355 | Q8YSU5 | Negative | 1237895 - 1238755 | 33404.9 |
| kynureninase | ASE92_05360 | A6H1P7 | Negative | 1238759 - 1240054 | 48960.7 |
| pyridoxamine 5'-phosphate oxidase | ASE92_05365 | Not Available | Negative | 1240120 - 1240608 | 18203.6 |
| 3-methyladenine dna glycosylase | ASE92_05370 | Q11UN5 | Negative | 1240662 - 1241267 | 22287.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

