Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | ASE92_05030 | Not Available | Positive | 1167963 - 1168916 | 36607.8 |
| peptidase | ASE92_05035 | Not Available | Positive | 1168942 - 1170807 | 70611.3 |
| hypothetical protein | ASE92_05040 | Not Available | Positive | 1170956 - 1171555 | 21923.3 |
| hypothetical protein | ASE92_05045 | Not Available | Negative | 1172209 - 1172748 | 20355.6 |
| hypothetical protein | ASE92_05050 | Not Available | Negative | 1172816 - 1173463 | 25159.8 |
| glutamyl-trna amidotransferase | ASE92_05055 | O66766 | Positive | 1173550 - 1175007 | 53392.9 |
| thioredoxin | ASE92_05060 | P35160 | Positive | 1175007 - 1176119 | 41488.7 |
| arsr family transcriptional regulator | ASE92_05065 | P35163 | Positive | 1176223 - 1176912 | 25933.6 |
| rna pseudouridine synthase | ASE92_05070 | Q89AH2 | Positive | 1177181 - 1177903 | 27539.2 |
| chloride channel protein | ASE92_05075 | Q9KM62 | Positive | 1177930 - 1179720 | 65839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

