Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase c, phosphocholine-specific | ASE92_00460 | Not Available | Negative | 115066 - 117594 | 95086.5 |
| lytic transglycosylase | ASE92_00465 | Q5HRU2 | Negative | 117713 - 119116 | 52998.4 |
| glutamyl-trna amidotransferase | ASE92_00470 | B3QYQ7 | Negative | 119287 - 120708 | 51436.1 |
| preprotein translocase | ASE92_00475 | A6H2G3 | Negative | 120727 - 120903 | 6236.79 |
| twin-arginine translocation protein, tata/e family subunit | ASE92_00480 | Not Available | Negative | 120939 - 121301 | 13329.8 |
| peptidase m23 | ASE92_00485 | Not Available | Negative | 121348 - 122652 | 48457.1 |
| hypothetical protein | ASE92_00490 | Not Available | Negative | 122774 - 123565 | 29313.5 |
| hypothetical protein | ASE92_00495 | Not Available | Negative | 123543 - 125237 | 63661.8 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | ASE92_00500 | B2RJH1 | Negative | 125327 - 125761 | 15892.1 |
| polysaccharide biosynthesis protein | ASE92_00505 | Not Available | Negative | 125812 - 127263 | 55508.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

