Leifsonia sp. Root1293

Bacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leifsonia

Description

Leifsonia sp. Root1293 is a bacterial strain characterized by its bacilli shape and possessing a single replicon. This feature indicates a streamlined genetic structure, which can impact its replication and adaptability in various environments. The strain is cataloged with the accession number LMEH00000000.1, which allows for its identification and reference in genomic databases. The bacilli shape of Leifsonia sp. Root1293 suggests a potential role in soil microbiology and plant interactions, particularly in root environments where such bacteria can inhabit. The single replicon configuration may facilitate efficient replication and adaptability, allowing the organism to thrive under specific ecological conditions. The traits of Leifsonia sp. Root1293 indicate that it could be involved in important ecological processes, such as nutrient cycling or plant growth promotion. Its presence in the root zone of plants could imply a symbiotic relationship, contributing to plant health and soil fertility. Overall, understanding the specific characteristics of Leifsonia sp. Root1293 enhances our knowledge of microbial diversity and its ecological implications in plant-microbe interactions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeifsonia
SpeciesLeifsonia sp. Root1293
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leifsonia sp. Root1293 contig_2, whole genome shotgun sequence.

Gene Summary

Adenine Count

573161 bp

Thymine Count

573330 bp

Guanine Count

1227548 bp

Cytosine Count

1237231 bp

Genome Length

3611286 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
keto-deoxy-phosphogluconate aldolaseASC59_13280Not AvailableNegative2820901 - 282150920840.2
2-deoxy-d-gluconate 3-dehydrogenaseASC59_13285Not AvailableNegative2821506 - 282226425899.8
molecular chaperone groesASC59_13290Not AvailableNegative2822261 - 282331336211.5
aldo/keto reductaseASC59_13295Not AvailablePositive2823502 - 282447334893.3
gntr family transcriptional regulatorASC59_13300Not AvailableNegative2824478 - 282524827348.6
metal-dependent hydrolaseASC59_13305Not AvailablePositive2825362 - 282626432916.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseASC59_13310Not AvailablePositive2826279 - 282712429766.3
short-chain dehydrogenaseASC59_13315Not AvailablePositive2827121 - 282790025842.8
l-rhamnose 1-epimeraseASC59_13320Not AvailablePositive2827897 - 282822012486.7
phosphoenolpyruvate carboxylaseASC59_13325Not AvailablePositive2828341 - 283099895960.4

Displaying genes 2581 – 2590 of 3286 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.