Leifsonia sp. Root1293

Bacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leifsonia

Description

Leifsonia sp. Root1293 is a bacterial strain characterized by its bacilli shape and possessing a single replicon. This feature indicates a streamlined genetic structure, which can impact its replication and adaptability in various environments. The strain is cataloged with the accession number LMEH00000000.1, which allows for its identification and reference in genomic databases. The bacilli shape of Leifsonia sp. Root1293 suggests a potential role in soil microbiology and plant interactions, particularly in root environments where such bacteria can inhabit. The single replicon configuration may facilitate efficient replication and adaptability, allowing the organism to thrive under specific ecological conditions. The traits of Leifsonia sp. Root1293 indicate that it could be involved in important ecological processes, such as nutrient cycling or plant growth promotion. Its presence in the root zone of plants could imply a symbiotic relationship, contributing to plant health and soil fertility. Overall, understanding the specific characteristics of Leifsonia sp. Root1293 enhances our knowledge of microbial diversity and its ecological implications in plant-microbe interactions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeifsonia
SpeciesLeifsonia sp. Root1293
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leifsonia sp. Root1293 contig_2, whole genome shotgun sequence.

Gene Summary

Adenine Count

573161 bp

Thymine Count

573330 bp

Guanine Count

1227548 bp

Cytosine Count

1237231 bp

Genome Length

3611286 bp

Protein-coding Genes

3235 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-diphosphocytidyl-2c-methyl-d-erythritol kinaseASC59_07005Not AvailableNegative1499219 - 150015432035.0
16s rrna methyltransferaseASC59_07010Not AvailableNegative1500187 - 150105630500.9
deoxyribonucleaseASC59_07015Not AvailableNegative1501053 - 150195232410.0
methionine--trna ligaseASC59_07020Not AvailableNegative1501945 - 150350757612.8
hypothetical proteinASC59_07025Not AvailablePositive1503636 - 150470637295.4
16s rrna methyltransferaseASC59_07035Not AvailableNegative1505740 - 150655528851.7
hypothetical proteinASC59_07040Not AvailablePositive1506698 - 150832060855.6
hypothetical proteinASC59_07045Not AvailablePositive1508322 - 150930832952.8
delta fatty acid desaturaseASC59_07050Not AvailablePositive1509538 - 151060540046.0
ligand-binding protein sh3ASC59_07055Not AvailableNegative1510728 - 151104510827.6

Displaying genes 1361 – 1370 of 3286 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.