Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 1142055 - 1142126 | Not Available |
| hypothetical protein | APY09_04745 | Not Available | Positive | 1142186 - 1143313 | 41889.1 |
| dna-binding protein | APY09_04750 | Not Available | Positive | 1143351 - 1143707 | 13082.6 |
| d-ribose transporter atp-binding protein | APY09_04755 | Not Available | Positive | 1143897 - 1145414 | 55163.6 |
| ribose abc transporter permease | APY09_04760 | Not Available | Positive | 1145411 - 1146415 | 34711.1 |
| laci family transcriptional regulator | APY09_04765 | Not Available | Positive | 1146509 - 1147573 | 36743.0 |
| l-fucose isomerase | APY09_04770 | Not Available | Positive | 1147763 - 1149526 | 65249.7 |
| carbohydrate kinase | APY09_04775 | Not Available | Positive | 1149697 - 1151106 | 50493.2 |
| laci family transcriptional regulator | APY09_04780 | Not Available | Positive | 1151081 - 1152076 | 35542.4 |
| rbsd or fucu transport | APY09_04785 | Not Available | Positive | 1152090 - 1152521 | 15582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

