Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 2182846 - 2182925 | Not Available |
| Integrase (y-int) | APY09_09270 | Not Available | Positive | 2183002 - 2184159 | 42601.0 |
| Glycerophosphoryl diester phosphodiesterase | APY09_09275 | Not Available | Negative | 2184225 - 2185061 | 30892.8 |
| Glycerophosphoryl diester phosphodiesterase | APY09_09280 | Not Available | Negative | 2185099 - 2186268 | 39624.9 |
| hypothetical protein | APY09_09285 | Not Available | Negative | 2186284 - 2186691 | 13778.4 |
| Minor tail protein | APY09_09290 | Not Available | Negative | 2186688 - 2187227 | 19653.1 |
| hypothetical | APY09_09295 | Not Available | Negative | 2187301 - 2187633 | 11986.9 |
| Endolysin | APY09_09300 | Not Available | Negative | 2187630 - 2188460 | 29172.2 |
| hypothetical protein | APY09_09305 | Not Available | Negative | 2188649 - 2189248 | 21478.5 |
| hypothetical protein | APY09_09310 | Not Available | Negative | 2189245 - 2190027 | 27076.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

