Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase | APY09_04690 | Not Available | Negative | 1134089 - 1134898 | 29017.8 |
| aspartate aminotransferase | APY09_04695 | Not Available | Negative | 1134898 - 1136103 | 43207.4 |
| Trna-trp | Not Available | Not Available | Positive | 1136285 - 1136357 | Not Available |
| preprotein translocase subunit sece | APY09_04705 | Not Available | Positive | 1136393 - 1136689 | 11023.4 |
| antitermination protein nusg | APY09_04710 | Not Available | Positive | 1136749 - 1137549 | 30046.0 |
| 50s ribosomal protein l11 | APY09_04715 | Not Available | Positive | 1137711 - 1138142 | 14798.0 |
| 50s ribosomal protein l1 | APY09_04720 | Not Available | Positive | 1138212 - 1138919 | 25258.8 |
| 50s ribosomal protein l10 | APY09_04725 | Not Available | Positive | 1139318 - 1139842 | 18304.2 |
| 50s ribosomal protein l7 | APY09_04730 | Not Available | Positive | 1139935 - 1140315 | 13203.8 |
| merr family transcriptional regulator | APY09_04735 | Not Available | Positive | 1141152 - 1141946 | 30320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

