Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APY09_04640 | Not Available | Positive | 1122165 - 1123739 | 56239.1 |
| abc transporter permease | APY09_04645 | Not Available | Positive | 1123858 - 1124811 | 34620.5 |
| abc transporter | APY09_04650 | Not Available | Positive | 1124815 - 1126863 | 73853.0 |
| abc transporter | APY09_04655 | Not Available | Positive | 1126860 - 1127678 | 29085.2 |
| glucose dehydrogenase | APY09_04660 | Not Available | Positive | 1127681 - 1128598 | 33040.6 |
| rok family transcriptional regulator | APY09_04665 | Not Available | Positive | 1128706 - 1129626 | 30879.5 |
| n-acetylmannosamine-6-phosphate 2-epimerase | APY09_04670 | Not Available | Positive | 1129636 - 1130310 | 23379.1 |
| mfs transporter | APY09_04675 | Not Available | Positive | 1130403 - 1131644 | 42191.6 |
| udp-n-acetylenolpyruvoylglucosamine reductase | APY09_04680 | Not Available | Positive | 1131655 - 1132743 | 37423.4 |
| adenosine deaminase | APY09_04685 | Not Available | Negative | 1133003 - 1134085 | 37952.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

