Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl pyrophosphate synthase | APY09_04590 | Not Available | Positive | 1115192 - 1116205 | 35984.8 |
| pyridine nucleotide-disulfide oxidoreductase | APY09_04595 | Not Available | Positive | 1116388 - 1117899 | 54516.3 |
| protease htpx | APY09_04600 | Not Available | Positive | 1118051 - 1118926 | 31708.0 |
| hypothetical protein | APY09_04605 | Not Available | Negative | 1118992 - 1119495 | 18403.2 |
| Trna-tyr | Not Available | Not Available | Positive | 1119594 - 1119678 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1119770 - 1119845 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1119870 - 1119946 | Not Available |
| 50s ribosomal protein l33 | APY09_04625 | Not Available | Positive | 1120001 - 1120171 | 6620.97 |
| sialidase | APY09_04630 | Not Available | Positive | 1120257 - 1121273 | 36259.5 |
| gntr family transcriptional regulator | APY09_04635 | Not Available | Negative | 1121333 - 1121887 | 20132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

