Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | APY09_04390 | Not Available | Positive | 1068801 - 1070534 | 64707.2 |
| naphthoate synthase | APY09_04395 | Not Available | Negative | 1070603 - 1071583 | 35892.9 |
| o-succinylbenzoate synthase | APY09_04400 | Not Available | Positive | 1071957 - 1072988 | 36607.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | APY09_04405 | Not Available | Positive | 1072998 - 1074659 | 56225.4 |
| trypsin | APY09_04410 | Not Available | Positive | 1074782 - 1076260 | 48742.0 |
| isochorismate synthase | APY09_04415 | Not Available | Negative | 1076563 - 1077849 | 45257.0 |
| ubiquinone biosynthesis methyltransferase ubie | APY09_04420 | Not Available | Positive | 1077848 - 1078555 | 25707.8 |
| serine protease | APY09_04425 | Not Available | Negative | 1078626 - 1078988 | 12998.0 |
| hypothetical protein | APY09_04430 | Not Available | Negative | 1079795 - 1080004 | 7699.79 |
| hypothetical protein | APY09_04435 | Not Available | Negative | 1080172 - 1080396 | 8066.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

