Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | APY09_03785 | Not Available | Positive | 905911 - 907104 | 42387.8 |
| tap-like protein | APY09_03790 | Not Available | Positive | 907141 - 908757 | 57230.6 |
| Trna-thr | Not Available | Not Available | Positive | 908873 - 908945 | Not Available |
| dna starvation/stationary phase protection protein | APY09_03800 | Not Available | Positive | 910176 - 910646 | 17091.2 |
| ferrochelatase | APY09_03805 | Not Available | Positive | 910817 - 911860 | 38119.5 |
| cystathionine gamma-synthase | APY09_03810 | Not Available | Positive | 911934 - 913136 | 42199.3 |
| chloride channel protein | APY09_03815 | Not Available | Negative | 913243 - 914478 | 41615.5 |
| marr family transcriptional regulator | APY09_03820 | Not Available | Negative | 914469 - 914930 | 17214.7 |
| nucleoid-associated protein lsr2 | APY09_03825 | Not Available | Positive | 915158 - 915487 | 12280.5 |
| hypothetical protein | APY09_03830 | Not Available | Negative | 915594 - 916127 | 17734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

