Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | APY09_02865 | Not Available | Negative | 694365 - 695501 | 41003.1 |
| 5'-nucleotidase | APY09_02870 | Not Available | Positive | 695713 - 696645 | 34814.2 |
| cobalt abc transporter | APY09_02880 | Not Available | Positive | 697785 - 699920 | 74012.6 |
| cobalt transporter | APY09_02885 | Not Available | Positive | 700124 - 700792 | 23347.4 |
| Trna-leu | Not Available | Not Available | Positive | 700917 - 701003 | Not Available |
| alkane 1-monooxygenase | APY09_02895 | Not Available | Positive | 701729 - 702808 | 38823.5 |
| arsr family transcriptional regulator | APY09_02900 | Not Available | Positive | 703601 - 703969 | 12759.3 |
| atpase p | APY09_02905 | Not Available | Positive | 703966 - 705870 | 64847.5 |
| transporter | APY09_02910 | Not Available | Positive | 706450 - 707862 | 49171.2 |
| histidine kinase | APY09_02915 | Not Available | Positive | 707882 - 709969 | 74110.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

