Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | APY09_02765 | Not Available | Negative | 672765 - 673331 | 19858.7 |
| 30s ribosomal protein s6 | APY09_02770 | Not Available | Negative | 673367 - 673657 | 10947.4 |
| mate family efflux transporter | APY09_02775 | Not Available | Negative | 673923 - 675296 | 47157.3 |
| replicative dna helicase | APY09_02780 | Not Available | Positive | 675636 - 676988 | 49183.7 |
| protein rard | APY09_02785 | Not Available | Negative | 677979 - 678929 | 33496.8 |
| glutamyl-trna reductase | APY09_02790 | Not Available | Negative | 678926 - 680248 | 46722.3 |
| uroporphyrinogen decarboxylase | APY09_02795 | Not Available | Positive | 680490 - 681587 | 38868.2 |
| hypothetical protein | APY09_02800 | Not Available | Positive | 681584 - 683050 | 49646.9 |
| porphobilinogen deaminase | APY09_02805 | Not Available | Positive | 683047 - 684081 | 35069.0 |
| uroporphyrinogen-iii synthase | APY09_02810 | Not Available | Positive | 684078 - 684899 | 27815.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

