Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APY09_02560 | Not Available | Negative | 614912 - 615631 | 25715.4 |
| hypothetical protein | APY09_02565 | Not Available | Negative | 615628 - 616686 | 35329.0 |
| abc transporter substrate-binding protein | APY09_02570 | Not Available | Negative | 616968 - 618581 | 56246.0 |
| cobalt abc transporter permease | APY09_02575 | Not Available | Negative | 618653 - 620632 | 66024.8 |
| hypothetical protein | APY09_02580 | Not Available | Positive | 621120 - 621305 | 6833.34 |
| aaa family atpase | APY09_02585 | Not Available | Positive | 621611 - 622897 | 47566.9 |
| gntr family transcriptional regulator | APY09_02590 | Not Available | Positive | 623011 - 624339 | 48233.5 |
| d-alanine--d-alanine ligase | APY09_02595 | Not Available | Positive | 624363 - 625391 | 36339.7 |
| haloacid dehalogenase | APY09_02600 | Not Available | Negative | 625626 - 626255 | 23220.6 |
| chromosome partitioning protein parb | APY09_02605 | Not Available | Negative | 626402 - 627688 | 46277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

