Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | APY09_01365 | Not Available | Positive | 311775 - 312485 | 25100.0 |
| Trna-thr | Not Available | Not Available | Positive | 312555 - 312630 | Not Available |
| thioredoxin | APY09_01375 | Not Available | Negative | 312841 - 313773 | 33023.7 |
| protein kinase | APY09_01380 | Not Available | Negative | 313834 - 315756 | 67546.1 |
| sugar abc transporter atp-binding protein | APY09_01385 | Not Available | Positive | 316018 - 317148 | 40497.6 |
| lipopolysaccharide kinase | APY09_01390 | Not Available | Positive | 317313 - 318575 | 47209.2 |
| glycerophosphodiester phosphodiesterase | APY09_01395 | Not Available | Positive | 318616 - 319359 | 26990.6 |
| hypothetical protein | APY09_01400 | Not Available | Negative | 319503 - 320708 | 42432.4 |
| hypothetical protein | APY09_01405 | Not Available | Negative | 320802 - 321029 | 8055.51 |
| flotillin | APY09_01410 | Not Available | Positive | 321274 - 322743 | 52977.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

