Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscl | APY09_01165 | Not Available | Positive | 263723 - 264121 | 14283.7 |
| toxin | APY09_01170 | Not Available | Negative | 264591 - 264812 | 8260.6 |
| prevent-host-death family protein | APY09_01175 | Not Available | Negative | 264805 - 269001 | 149559.0 |
| hypothetical protein | APY09_01180 | Not Available | Negative | 269027 - 269944 | 32439.4 |
| Trna-arg | Not Available | Not Available | Positive | 269960 - 270032 | Not Available |
| universal stress protein | APY09_01190 | Not Available | Negative | 270186 - 271118 | 31662.7 |
| glycoside hydrolase | APY09_01195 | Not Available | Negative | 271252 - 271968 | 23539.2 |
| dtxr family iron (metal) dependent repressor | APY09_01200 | Not Available | Negative | 272382 - 273059 | 24525.5 |
| phosphoserine aminotransferase | APY09_01205 | Not Available | Positive | 273233 - 274360 | 39748.1 |
| mfs transporter | APY09_01210 | Not Available | Negative | 274380 - 275669 | 46381.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

