Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | APY09_01060 | Not Available | Negative | 234528 - 234902 | 13841.1 |
| beta-glucosidase | APY09_01065 | Not Available | Negative | 235409 - 238360 | 105888.0 |
| peptidase | APY09_01070 | Not Available | Negative | 238679 - 240127 | 50616.6 |
| dna-directed rna polymerase subunit beta' | APY09_01075 | Not Available | Negative | 240359 - 244279 | 144848.0 |
| dna-directed rna polymerase subunit beta | APY09_01080 | Not Available | Negative | 244295 - 247771 | 127742.0 |
| Trna-met | Not Available | Not Available | Positive | 248026 - 248102 | Not Available |
| pyruvate dehydrogenase | APY09_01090 | Not Available | Positive | 248244 - 249986 | 61556.9 |
| oxidoreductase | APY09_01095 | Not Available | Positive | 250245 - 251810 | 59430.7 |
| fructosamine kinase | APY09_01100 | Not Available | Negative | 251891 - 252703 | 29187.4 |
| hypothetical protein | APY09_01105 | Not Available | Positive | 252948 - 253127 | 6545.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

