Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APY09_09080 | Not Available | Positive | 2138490 - 2138936 | 15937.9 |
| histidine kinase | APY09_09085 | Not Available | Positive | 2138929 - 2139468 | 19454.9 |
| (dimethylallyl)adenosine trna methylthiotransferase | APY09_09090 | Not Available | Negative | 2139857 - 2141395 | 55378.7 |
| damage-inducible protein cina | APY09_09095 | Not Available | Negative | 2141407 - 2141919 | 17073.3 |
| recx family transcriptional regulator | APY09_09100 | Not Available | Negative | 2141907 - 2142533 | 22827.7 |
| dna recombination/repair protein reca | APY09_09105 | Not Available | Negative | 2142537 - 2143628 | 38354.8 |
| hypothetical protein | APY09_09110 | Not Available | Negative | 2143877 - 2144101 | 8245.49 |
| xre family transcriptional regulator | APY09_09115 | Not Available | Negative | 2144105 - 2144419 | 11488.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | APY09_09120 | Not Available | Negative | 2144590 - 2145306 | 25907.7 |
| cell division protein ftsk | APY09_09125 | Not Available | Negative | 2145324 - 2148179 | 99653.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

