Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | APY09_09025 | Not Available | Positive | 2126967 - 2129027 | 72954.2 |
| transcriptional regulator | APY09_09030 | Not Available | Negative | 2129098 - 2129685 | 21396.2 |
| peptidoglycan-binding protein lysm | APY09_09035 | Not Available | Negative | 2129742 - 2130206 | 16349.7 |
| lexa family transcriptional regulator | APY09_09045 | Not Available | Positive | 2130394 - 2131074 | 24246.8 |
| l-lactate dehydrogenase | APY09_09050 | Not Available | Negative | 2131138 - 2132127 | 34668.4 |
| atp-dependent helicase | APY09_09055 | Not Available | Negative | 2132230 - 2134170 | 68232.2 |
| gtp-binding protein | APY09_09060 | Not Available | Negative | 2134167 - 2135699 | 55009.1 |
| mfs transporter | APY09_09065 | Not Available | Positive | 2135785 - 2136399 | 22219.3 |
| diaminopimelate epimerase | APY09_09070 | Not Available | Negative | 2136469 - 2137392 | 32473.4 |
| trna dimethylallyltransferase | APY09_09075 | Not Available | Negative | 2137440 - 2138429 | 35606.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

