Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | APY09_08875 | Not Available | Negative | 2093894 - 2094481 | 21951.3 |
| hypothetical protein | APY09_08880 | Not Available | Negative | 2094833 - 2095600 | 26869.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | APY09_08885 | Not Available | Negative | 2095597 - 2096322 | 25175.9 |
| hypothetical protein | APY09_08890 | Not Available | Negative | 2096319 - 2096966 | 22654.7 |
| hypothetical protein | APY09_08895 | Not Available | Positive | 2097059 - 2097289 | 7867.3 |
| dna polymerase iii subunit alpha | APY09_08900 | Not Available | Negative | 2097344 - 2100886 | 130821.0 |
| rna pseudouridine synthase | APY09_08905 | Not Available | Negative | 2101016 - 2101921 | 32445.9 |
| signal peptidase ii | APY09_08910 | Not Available | Negative | 2101930 - 2102433 | 17707.6 |
| cell division protein diviva | APY09_08915 | Not Available | Negative | 2102504 - 2103085 | 21610.0 |
| hypothetical protein | APY09_08920 | Not Available | Negative | 2103258 - 2103515 | 9688.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

