Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-nucleoside phosphorylase | APY09_00660 | Not Available | Negative | 153261 - 154547 | 44666.9 |
| cytidine deaminase | APY09_00665 | Not Available | Negative | 154534 - 154989 | 15449.2 |
| abc transporter permease | APY09_00670 | Not Available | Negative | 154998 - 156278 | 44167.6 |
| abc transporter permease | APY09_00675 | Not Available | Negative | 156265 - 157404 | 39223.9 |
| heme abc transporter atp-binding protein | APY09_00680 | Not Available | Negative | 157401 - 158966 | 55468.7 |
| hypothetical protein | APY09_00685 | Not Available | Negative | 159057 - 160151 | 37544.5 |
| metallophosphatase | APY09_00690 | Not Available | Negative | 160303 - 162606 | 79354.9 |
| endonuclease | APY09_00695 | Not Available | Negative | 162675 - 164924 | 76207.1 |
| inosine-5-monophosphate dehydrogenase | APY09_00700 | Not Available | Negative | 165202 - 166326 | 40085.9 |
| dna polymerase iii subunit epsilon | APY09_00705 | Not Available | Positive | 166407 - 167159 | 28101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

