Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | APY09_08775 | Not Available | Positive | 2069602 - 2071356 | 60387.4 |
| histidine kinase | APY09_08780 | Not Available | Positive | 2071353 - 2072999 | 57836.3 |
| alpha-l-fucosidase | APY09_08785 | Not Available | Negative | 2073106 - 2076654 | 127791.0 |
| luxr family transcriptional regulator | APY09_08790 | Not Available | Negative | 2076908 - 2077522 | 22441.8 |
| ribonuclease iii | APY09_08795 | Not Available | Negative | 2077601 - 2078323 | 26129.8 |
| hypothetical protein | APY09_08800 | Not Available | Negative | 2078323 - 2078889 | 20239.5 |
| hypothetical protein | APY09_08805 | Not Available | Negative | 2078882 - 2079592 | 25266.7 |
| pantetheine-phosphate adenylyltransferase | APY09_08810 | Not Available | Negative | 2079623 - 2080093 | 16856.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | APY09_08815 | Not Available | Negative | 2080093 - 2080728 | 22100.9 |
| atp-dependent dna helicase recg | APY09_08820 | Not Available | Negative | 2080752 - 2082890 | 76482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

