Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | APY09_08410 | Not Available | Negative | 1976577 - 1978205 | 57537.5 |
| Trna-val | Not Available | Not Available | Positive | 1979900 - 1979974 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1979976 - 1980046 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1980081 - 1980153 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1980210 - 1980281 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1980283 - 1980355 | Not Available |
| glycogen debranching protein | APY09_08440 | Not Available | Positive | 1980510 - 1982621 | 79531.0 |
| hypothetical protein | APY09_08445 | Not Available | Positive | 1982764 - 1983288 | 19149.0 |
| 3'-5' exonuclease | APY09_08450 | Not Available | Positive | 1983289 - 1984533 | 45763.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | APY09_08455 | Not Available | Negative | 1984544 - 1986445 | 67929.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

