Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase | APY09_08360 | Not Available | Negative | 1963747 - 1964373 | 21844.8 |
| hit family hydrolase | APY09_08365 | Not Available | Negative | 1964373 - 1964966 | 21245.2 |
| threonine--trna ligase | APY09_08370 | Not Available | Negative | 1964972 - 1967005 | 75556.8 |
| gnat family acetyltransferase | APY09_08375 | Not Available | Negative | 1967078 - 1968103 | 38335.7 |
| carboxylate--amine ligase | APY09_08380 | Not Available | Negative | 1968207 - 1969484 | 48018.3 |
| hypothetical protein | APY09_08385 | Not Available | Positive | 1969556 - 1970407 | 29514.8 |
| hypothetical protein | APY09_08390 | Not Available | Positive | 1970446 - 1971156 | 24800.8 |
| adventurous gliding motility protein agmx | APY09_08395 | Not Available | Positive | 1971244 - 1971996 | 26025.8 |
| alpha-amylase | APY09_08400 | Not Available | Positive | 1972018 - 1973784 | 65843.8 |
| peptidase | APY09_08405 | Not Available | Negative | 1974034 - 1975956 | 67308.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

