Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | APY09_08110 | Not Available | Negative | 1906398 - 1907267 | 30161.1 |
| aminodeoxychorismate lyase | APY09_08115 | Not Available | Negative | 1907264 - 1908316 | 37394.2 |
| rnase h domain protein, yqgf family | APY09_08120 | Not Available | Negative | 1908697 - 1909179 | 17498.3 |
| alanine--trna ligase | APY09_08125 | Not Available | Negative | 1909182 - 1911890 | 96762.4 |
| 30s ribosomal protein s4 | APY09_08130 | Not Available | Negative | 1912011 - 1912634 | 23842.0 |
| aaa family atpase | APY09_08135 | Not Available | Negative | 1912754 - 1914097 | 47619.7 |
| type iv secretion protein rhs | APY09_08140 | Not Available | Negative | 1914108 - 1915424 | 45084.4 |
| hypothetical protein | APY09_08145 | Not Available | Negative | 1915630 - 1916754 | 37191.5 |
| iron-dicitrate transporter atp-binding subunit | APY09_08150 | Not Available | Negative | 1917046 - 1917840 | 28563.6 |
| abc transporter permease | APY09_08155 | Not Available | Negative | 1917837 - 1918886 | 35297.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

