Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerd | APY09_07910 | Not Available | Negative | 1855970 - 1856917 | 33783.0 |
| transketolase | APY09_07915 | Not Available | Positive | 1856946 - 1859129 | 77546.7 |
| glucose-6-phosphate dehydrogenase | APY09_07920 | Not Available | Positive | 1859299 - 1860825 | 56962.5 |
| oxppcycle protein opca | APY09_07925 | Not Available | Positive | 1860822 - 1861763 | 33891.4 |
| 6-phosphogluconolactonase | APY09_07930 | Not Available | Positive | 1861766 - 1862509 | 26104.9 |
| hypothetical protein | APY09_07935 | Not Available | Negative | 1862519 - 1863520 | 37536.8 |
| preprotein translocase subunit secg | APY09_07940 | Not Available | Negative | 1863527 - 1863772 | 8407.68 |
| triosephosphate isomerase | APY09_07945 | Not Available | Negative | 1863935 - 1864711 | 27584.8 |
| phosphoglycerate kinase | APY09_07950 | Not Available | Negative | 1864715 - 1865905 | 41313.7 |
| glyceraldehyde-3-phosphate dehydrogenase | APY09_07955 | Not Available | Negative | 1866013 - 1867020 | 35775.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

