Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteasome accessory factor pafa2 | APY09_07610 | Not Available | Positive | 1794600 - 1796120 | 55836.7 |
| ubiquitin | APY09_07615 | Not Available | Positive | 1796145 - 1796321 | 6102.93 |
| pup--protein ligase | APY09_07620 | Not Available | Positive | 1796323 - 1797708 | 50583.9 |
| peptidylprolyl isomerase | APY09_07625 | Not Available | Positive | 1797705 - 1798745 | 35716.4 |
| chorismate synthase | APY09_07630 | Not Available | Positive | 1798806 - 1800017 | 41962.8 |
| shikimate kinase | APY09_07635 | Not Available | Positive | 1800014 - 1800523 | 17895.4 |
| 3-dehydroquinate synthase | APY09_07640 | Not Available | Positive | 1800520 - 1801602 | 38163.8 |
| shikimate kinase | APY09_07645 | Not Available | Positive | 1801599 - 1802123 | 18396.0 |
| elongation factor p | APY09_07650 | Not Available | Positive | 1802148 - 1802711 | 20680.5 |
| antitermination protein nusb | APY09_07655 | Not Available | Positive | 1802711 - 1803331 | 22554.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

