Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | APY09_07560 | Not Available | Positive | 1786547 - 1787137 | 22152.3 |
| Trna-leu | Not Available | Not Available | Positive | 1787216 - 1787305 | Not Available |
| thioredoxin | APY09_07570 | Not Available | Positive | 1787374 - 1788045 | 24691.2 |
| phosphoribosyl-atp diphosphatase | APY09_07575 | Not Available | Positive | 1788042 - 1788554 | 18357.6 |
| pyridine nucleotide-disulfide oxidoreductase | APY09_07580 | Not Available | Positive | 1788626 - 1789723 | 39215.6 |
| dna primase | APY09_07585 | Not Available | Positive | 1789757 - 1790044 | 10832.7 |
| aldo/keto reductase | APY09_07590 | Not Available | Negative | 1790146 - 1791078 | 32637.7 |
| recombinase recb | APY09_07595 | Not Available | Negative | 1791083 - 1791937 | 31906.9 |
| transposase | APY09_07600 | Not Available | Positive | 1792017 - 1793066 | 38503.6 |
| proteasome atpase | APY09_07605 | Not Available | Positive | 1793059 - 1794603 | 55810.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

