Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | APY09_07350 | Not Available | Positive | 1739510 - 1740937 | 50954.4 |
| tyrosine--trna ligase | APY09_07355 | Not Available | Positive | 1741008 - 1742270 | 45947.8 |
| hypothetical protein | APY09_07370 | Not Available | Negative | 1742867 - 1743910 | 35738.0 |
| hydrolase | APY09_07375 | Not Available | Positive | 1743863 - 1745644 | 62745.7 |
| dutp diphosphatase | APY09_07380 | Not Available | Positive | 1745644 - 1745832 | 6380.46 |
| cytochrome c peroxidase | APY09_07385 | Not Available | Positive | 1745829 - 1746656 | 29344.3 |
| atp-nad kinase | APY09_07390 | Not Available | Positive | 1746653 - 1747483 | 29464.4 |
| dna repair protein recn | APY09_07395 | Not Available | Positive | 1747480 - 1749156 | 59768.5 |
| thiamine pyrophosphokinase | APY09_07400 | Not Available | Positive | 1749153 - 1750298 | 39459.7 |
| hypothetical protein | APY09_07405 | Not Available | Positive | 1750295 - 1751188 | 29285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

