Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerc | APY09_07150 | Not Available | Positive | 1697376 - 1698287 | 32990.3 |
| 30s ribosomal protein s2 | APY09_07155 | Not Available | Positive | 1699293 - 1700120 | 30602.8 |
| elongation factor ts | APY09_07160 | Not Available | Positive | 1700146 - 1700973 | 29243.0 |
| uridylate kinase | APY09_07165 | Not Available | Positive | 1701104 - 1701814 | 25123.2 |
| ribosome-recycling factor | APY09_07170 | Not Available | Positive | 1701853 - 1702410 | 20834.7 |
| phosphatidate cytidylyltransferase | APY09_07175 | Not Available | Positive | 1702410 - 1703321 | 32153.7 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | APY09_07180 | Not Available | Positive | 1703378 - 1704598 | 43980.7 |
| hypothetical protein | APY09_07185 | Not Available | Positive | 1704631 - 1704999 | 13691.8 |
| cell division protein diviva | APY09_07190 | Not Available | Positive | 1704996 - 1705544 | 20435.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | APY09_07195 | Not Available | Positive | 1705544 - 1706815 | 44622.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

