Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY09_07100 | Not Available | Positive | 1689495 - 1689734 | 8675.46 |
| 16s rrna processing protein rimm | APY09_07105 | Not Available | Positive | 1689824 - 1690336 | 18116.4 |
| trna (guanine-n1)-methyltransferase | APY09_07110 | Not Available | Positive | 1690308 - 1691693 | 50065.4 |
| 50s ribosomal protein l19 | APY09_07115 | Not Available | Positive | 1691866 - 1692222 | 13130.9 |
| s26 family signal peptidase | APY09_07120 | Not Available | Positive | 1692333 - 1693079 | 26909.0 |
| ribonuclease hii | APY09_07125 | Not Available | Positive | 1693076 - 1693747 | 23462.9 |
| protein often found in actinomycetes clustered with signal peptidase and/or rnasehii | APY09_07130 | Not Available | Positive | 1693802 - 1694101 | 11816.0 |
| choloylglycine hydrolase | APY09_07135 | Not Available | Positive | 1694229 - 1694669 | 16290.6 |
| mg chelatase-like protein | APY09_07140 | Not Available | Positive | 1694699 - 1696213 | 53348.2 |
| dna protecting protein dpra | APY09_07145 | Not Available | Positive | 1696206 - 1697366 | 40997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

