Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY09_06850 | Not Available | Negative | 1627045 - 1627257 | 7619.1 |
| transcriptional regulator | APY09_06855 | Not Available | Positive | 1627256 - 1627687 | 15572.3 |
| threonine dehydratase | APY09_06860 | Not Available | Negative | 1627863 - 1629149 | 45927.9 |
| oligoribonuclease | APY09_06865 | Not Available | Positive | 1629286 - 1629882 | 21671.8 |
| single-stranded dna-binding protein | APY09_06870 | Not Available | Positive | 1630128 - 1630916 | 27704.3 |
| 4-phosphopantetheinyl transferase | APY09_06875 | Not Available | Negative | 1630913 - 1631377 | 16309.2 |
| acp s-malonyltransferase | APY09_06880 | Not Available | Negative | 1631381 - 1640608 | 324248.0 |
| methylmalonyl-coa carboxyltransferase | APY09_06885 | Not Available | Negative | 1640653 - 1642209 | 55489.1 |
| carboxylate--amine ligase | APY09_06890 | Not Available | Negative | 1642206 - 1643999 | 63764.3 |
| biotin--acetyl-coa-carboxylase ligase | APY09_06895 | Not Available | Negative | 1643986 - 1644870 | 30428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

