Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | APY09_06100 | Not Available | Positive | 1464206 - 1466179 | 71575.1 |
| s-ribosylhomocysteine lyase | APY09_06105 | Not Available | Positive | 1466183 - 1466662 | 17580.7 |
| hypothetical protein | APY09_06110 | Not Available | Negative | 1466781 - 1467278 | 17882.7 |
| branched-chain amino acid aminotransferase | APY09_06115 | Not Available | Positive | 1467477 - 1468625 | 41882.5 |
| lysr family transcriptional regulator | APY09_06120 | Not Available | Negative | 1468710 - 1469615 | 32264.0 |
| hypothetical protein | APY09_06125 | Not Available | Positive | 1469704 - 1470765 | 35696.5 |
| abc transporter permease | APY09_06130 | Not Available | Positive | 1470885 - 1472486 | 56119.7 |
| abc transporter | APY09_06135 | Not Available | Positive | 1472483 - 1474240 | 61556.2 |
| mannose-6-phosphate isomerase | APY09_06140 | Not Available | Positive | 1474321 - 1475538 | 43594.9 |
| glutamine amidotransferase | APY09_06145 | Not Available | Negative | 1475755 - 1476447 | 24681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

