Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APY09_06000 | Not Available | Negative | 1443072 - 1443611 | 19674.5 |
| dna repair protein reco | APY09_06005 | Not Available | Positive | 1443854 - 1444591 | 26571.5 |
| udp pyrophosphate synthase | APY09_06010 | Not Available | Positive | 1444588 - 1445412 | 30711.6 |
| hypothetical protein | APY09_06015 | Not Available | Negative | 1445409 - 1445951 | 19209.0 |
| fur family transcriptional regulator | APY09_06020 | Not Available | Negative | 1446065 - 1446454 | 14588.0 |
| abc transporter | APY09_06025 | Not Available | Negative | 1446468 - 1447397 | 31999.1 |
| abc transporter atp-binding protein | APY09_06030 | Not Available | Negative | 1447411 - 1448235 | 28871.5 |
| abc transporter substrate-binding protein | APY09_06035 | Not Available | Negative | 1448232 - 1449272 | 36473.0 |
| laci family transcriptional regulator | APY09_06040 | Not Available | Negative | 1449338 - 1450354 | 36161.8 |
| abc transporter substrate-binding protein | APY09_06045 | Not Available | Positive | 1450520 - 1451746 | 42634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

