Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese transporter | APY09_05850 | Not Available | Negative | 1401373 - 1402632 | 43227.9 |
| arginine--trna ligase | APY09_05855 | Not Available | Positive | 1402803 - 1404482 | 60427.2 |
| diaminopimelate decarboxylase | APY09_05860 | Not Available | Positive | 1404487 - 1405887 | 49231.7 |
| peptidase s8 | APY09_05865 | Not Available | Positive | 1406255 - 1408276 | 71942.6 |
| peptidase s8 | APY09_05870 | Not Available | Positive | 1408515 - 1412849 | 151794.0 |
| copg family transcriptional regulator | APY09_05875 | Not Available | Positive | 1413009 - 1413278 | 9663.37 |
| hypothetical protein | APY09_05880 | Not Available | Negative | 1413637 - 1414674 | 38534.0 |
| hypothetical protein | APY09_05885 | Not Available | Negative | 1414674 - 1415717 | 39579.8 |
| hypothetical protein | APY09_05890 | Not Available | Positive | 1415885 - 1417159 | 48154.6 |
| peptidase s8 | APY09_05895 | Not Available | Positive | 1417410 - 1419845 | 85803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

