Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | APY09_05500 | Not Available | Negative | 1324224 - 1325387 | 42087.4 |
| glycosyl transferase family 1 | APY09_05505 | Not Available | Positive | 1325505 - 1326602 | 38460.5 |
| glycosyl transferase family 2 | APY09_05510 | Not Available | Positive | 1326599 - 1327591 | 34757.1 |
| nucleoside-diphosphate sugar epimerase | APY09_05515 | Not Available | Positive | 1327693 - 1328544 | 30956.6 |
| rhamnan synthesis protein f | APY09_05520 | Not Available | Positive | 1328549 - 1330411 | 69153.6 |
| acyltransferase | APY09_05525 | Not Available | Positive | 1330408 - 1331679 | 47815.5 |
| hypothetical protein | APY09_05530 | Not Available | Positive | 1331676 - 1332980 | 45890.5 |
| abc transporter | APY09_05535 | Not Available | Positive | 1333009 - 1333863 | 31199.9 |
| abc transporter atp-binding protein | APY09_05540 | Not Available | Positive | 1333863 - 1335155 | 47028.0 |
| hypothetical protein | APY09_05545 | Not Available | Positive | 1335306 - 1337030 | 62942.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

