Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY09_05450 | Not Available | Positive | 1310892 - 1312238 | 46658.3 |
| alcohol dehydrogenase | APY09_05455 | Not Available | Positive | 1312377 - 1313519 | 39851.9 |
| hypothetical protein | APY09_05460 | Not Available | Negative | 1313623 - 1313871 | 8489.43 |
| glycosyl transferase family 1 | APY09_05465 | Not Available | Negative | 1315364 - 1316563 | 44479.1 |
| polysaccharide biosynthesis protein | APY09_05470 | Not Available | Negative | 1316556 - 1317905 | 48914.3 |
| licd family protein | APY09_05475 | Not Available | Negative | 1317902 - 1318801 | 33264.6 |
| licd family protein | APY09_05480 | Not Available | Negative | 1318833 - 1319690 | 32962.6 |
| lic-1 operon protein | APY09_05485 | Not Available | Negative | 1319753 - 1320721 | 33268.3 |
| marr family transcriptional regulator | APY09_05490 | Not Available | Negative | 1320718 - 1322547 | 68711.8 |
| hypothetical protein | APY09_05495 | Not Available | Negative | 1322642 - 1324195 | 55214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

