Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | APY09_05400 | Not Available | Negative | 1298176 - 1299252 | 39791.5 |
| gntr family transcriptional regulator | APY09_05405 | Not Available | Negative | 1299363 - 1300130 | 28388.9 |
| 5-dehydro-2-deoxygluconokinase | APY09_05410 | Not Available | Positive | 1300321 - 1301286 | 34792.1 |
| 5-deoxy-glucuronate isomerase | APY09_05415 | Not Available | Positive | 1301360 - 1302232 | 31537.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | APY09_05420 | Not Available | Positive | 1302255 - 1304162 | 68772.2 |
| methylmalonate-semialdehyde dehydrogenase | APY09_05425 | Not Available | Positive | 1304448 - 1305950 | 53524.9 |
| 2-keto-myo-inositol dehydratase | APY09_05430 | Not Available | Positive | 1306213 - 1307142 | 35007.2 |
| inositol 2-dehydrogenase | APY09_05435 | Not Available | Positive | 1307176 - 1308186 | 36696.5 |
| protein iolh | APY09_05440 | Not Available | Positive | 1308270 - 1309139 | 33301.9 |
| mfs transporter | APY09_05445 | Not Available | Positive | 1309189 - 1310805 | 57520.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

