Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | strain XH001 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
395951 bp
Thymine Count
399677 bp
Guanine Count
770386 bp
Cytosine Count
770009 bp
Genome Length
2336123 bp
Protein-coding Genes
1903 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin phd | APY09_05095 | Not Available | Negative | 1223289 - 1223552 | 9457.09 |
| hypothetical protein | APY09_05100 | Not Available | Positive | 1223705 - 1225027 | 47492.4 |
| dna-binding protein | APY09_05105 | Not Available | Negative | 1225029 - 1225634 | 20444.0 |
| mfs transporter permease | APY09_05110 | Not Available | Negative | 1225603 - 1226196 | 21873.6 |
| transporter | APY09_05115 | Not Available | Positive | 1226385 - 1228286 | 67589.9 |
| gnat family acetyltransferase | APY09_05120 | Not Available | Negative | 1228301 - 1228873 | 21382.2 |
| abc transporter permease | APY09_05125 | Not Available | Positive | 1229092 - 1232502 | 121473.0 |
| glutamine amidotransferase | APY09_05130 | Not Available | Positive | 1232617 - 1233201 | 20328.6 |
| deoxyribonuclease | APY09_05135 | Not Available | Positive | 1233251 - 1234162 | 33024.0 |
| transglycosylase | APY09_05140 | Not Available | Positive | 1234382 - 1235542 | 39405.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

