Pseudoalteromonas lipolytica strain UCD-48B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas lipolytica strain UCD-48B is characterized as a rod-shaped bacterium. This morphological trait is typical for members of the Pseudoalteromonas genus, which are known for their diverse metabolic capabilities and adaptability to various marine environments. This strain has a singular replicon, indicating it possesses a single chromosome, which is a characteristic feature of many bacterial species. The genetic information for Pseudoalteromonas lipolytica strain UCD-48B is cataloged under the accession number LJTC00000000.1, providing a reference for researchers interested in studying its genomic properties and potential applications. Pseudoalteromonas species, including strain UCD-48B, are often associated with marine ecosystems, where they play critical roles in nutrient cycling and organic matter degradation. Their ability to break down lipids suggests potential applications in bioremediation and industrial bioprocessing, particularly in contexts involving oily waste. The ecological significance of this strain may lie in its contribution to the degradation of organic pollutants in marine environments, thus supporting overall ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas lipolytica
Strainstrain UCD-48B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas lipolytica strain UCD-48B


Gene Summary

Adenine Count

1348513 bp

Thymine Count

1351141 bp

Guanine Count

944433 bp

Cytosine Count

942785 bp

Genome Length

4586948 bp

Protein-coding Genes

3997 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive110 - 224Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive274 - 388Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive326 - 440Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive341 - 455Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive360 - 474Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive420 - 534Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive611 - 725Not Available
hypothetical proteinAOG27_00015Not AvailableNegative1064 - 182228119.1
peptidase s41AOG27_00020Q44879Negative1858 - 306643951.7
proteaseAOG27_00025P37690Negative3162 - 430142916.2

Displaying genes 1 – 10 of 4114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

230 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000558D-galacto-hexodialdoseC6H10O6Chemical structure of D-galacto-hexodialdoseNot available
Average178.14Da
Monoisotopic178.047738Da

Displaying 1–10 of 230 metabolites

Health Effects

No health effects information available for this bacterium.