Pseudoalteromonas lipolytica strain UCD-48B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas lipolytica strain UCD-48B is characterized as a rod-shaped bacterium. This morphological trait is typical for members of the Pseudoalteromonas genus, which are known for their diverse metabolic capabilities and adaptability to various marine environments. This strain has a singular replicon, indicating it possesses a single chromosome, which is a characteristic feature of many bacterial species. The genetic information for Pseudoalteromonas lipolytica strain UCD-48B is cataloged under the accession number LJTC00000000.1, providing a reference for researchers interested in studying its genomic properties and potential applications. Pseudoalteromonas species, including strain UCD-48B, are often associated with marine ecosystems, where they play critical roles in nutrient cycling and organic matter degradation. Their ability to break down lipids suggests potential applications in bioremediation and industrial bioprocessing, particularly in contexts involving oily waste. The ecological significance of this strain may lie in its contribution to the degradation of organic pollutants in marine environments, thus supporting overall ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas lipolytica
Strainstrain UCD-48B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas lipolytica strain UCD-48B scaffold_68, whole

Gene Summary

Adenine Count

1348513 bp

Thymine Count

1351141 bp

Guanine Count

944433 bp

Cytosine Count

942785 bp

Genome Length

4586948 bp

Protein-coding Genes

3997 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11AOG27_18015Q3IJK7Negative3970835 - 397122113664.5
30s ribosomal protein s13AOG27_18020Q3IJK6Negative3971235 - 397159113084.2
preprotein translocase subunit secyAOG27_18025P78283Negative3971856 - 397318448208.1
50s ribosomal protein l15AOG27_18030Q3IJK4Negative3973195 - 397362915113.5
50s ribosomal protein l30AOG27_18035Q3IJK3Negative3973634 - 39738166664.33
30s ribosomal protein s5AOG27_18040Q3IJK2Negative3973820 - 397432617587.4
50s ribosomal protein l18AOG27_18045Q3IJK1Negative3974336 - 397468612592.2
50s ribosomal protein l6AOG27_18050Q3IJK0Negative3974696 - 397522919160.1
30s ribosomal protein s8AOG27_18055Q3IJJ9Negative3975243 - 397563513969.2
30s ribosomal protein s14AOG27_18060Q3IJJ8Negative3975657 - 397596211399.8

Displaying genes 3521 – 3530 of 4114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

230 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000558D-galacto-hexodialdoseC6H10O6Chemical structure of D-galacto-hexodialdoseNot available
Average178.14Da
Monoisotopic178.047738Da

Displaying 1–10 of 230 metabolites

Health Effects

No health effects information available for this bacterium.